BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F08SP1|AL428944
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1688 1756 0.0
>3x_Contig1688
Length = 18058
Score = 1756 bits (883), Expect = 0.0
Identities = 894/899 (99%), Gaps = 1/899 (0%)
Strand = Plus / Plus
Query: 1 tcaattcaaataacgtcatagataacagtttgatatgtttaggtttgaatctttcacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6372 tcaattcaaataacgtcatagataacagtttgatatgtttaggtttgaatctttcacaat 6431
Query: 61 ttctttccacaaacaaccttaaagtgtaagcggcagagcccaatctgttctcgtatagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6432 ttctttccacaaacaaccttaaagtgtaagcggcagagcccaatctgttctcgtatagtt 6491
Query: 121 ctatcctagcatccttgccattctctaatctggttttttcatatctagtcttttcggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6492 ctatcctagcatccttgccattctctaatctggttttttcatatctagtcttttcggact 6551
Query: 181 ctataatggttataatagcatccaatatgggagagaa-cgctttcacgggaacctcagtt 239
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6552 ctataatggttataatagcatccaatatgggagagaagcgctttcacgggaacctcagtt 6611
Query: 240 ggtgaggttttcaacagtaaatttagattatcgagagaatcattacgagtcttcaatttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6612 ggtgaggttttcaacagtaaatttagattatcgagagaatcattacgagtcttcaatttt 6671
Query: 300 agagatgacagtcctgttacgatgacagacacctcaaagctaaagctcattagttatgta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6672 agagatgacagtcctgttacgatgacagacacctcaaagctaaagctcattagttatgta 6731
Query: 360 acgaagacatttgttgcagtttatcttcaatataacgttcggttctctctttctatagac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6732 acgaagacatttgttgcagtttatcttcaatataacgttcggttctctctttctatagac 6791
Query: 420 agacgtttatctttgatatttctttatttacattatttgcattatttcatgcaaatgtaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6792 agacgtttatctttgatatttctttatttacattatttgcattatttcatgcaaatgtaa 6851
Query: 480 agttaggaaaaactgtaaatagacgtggtaatgagatatctcacagttaaaaccgtattg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6852 agttaggaaaaactgtaaatagacgtggtaatgagatatctcacagttaaaaccgtattg 6911
Query: 540 aaatgcagaagctttgagaatacctttaactaatactccagatttattcgatctaaatat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6912 aaatgcagaagctttgagaatacctttaactaatactccagatttattcgatctaaatat 6971
Query: 600 tgtttaaatktacacatataatgactatkatktttkaagtaaagttggatagggttaatt 659
||||||||| |||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 6972 tgtttaaatttacacatataatgactattattttttaagtaaagttggatagggttaatt 7031
Query: 660 taaacaacaacaccagagttggaagcaattcttggccacaagtcggcacattccttaccg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7032 taaacaacaacaccagagttggaagcaattcttggccacaagtcggcacattccttaccg 7091
Query: 720 actggaccagtaacagcggaacccttcatttcacccttagggttagcaatgacaccggca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7092 actggaccagtaacagcggaacccttcatttcacccttagggttagcaatgacaccggca 7151
Query: 780 ttgtcttcgaagtacaagaagacaccgtcctttcttctccaagccttggattgtctgaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7152 ttgtcttcgaagtacaagaagacaccgtcctttcttctccaagccttggattgtctgaca 7211
Query: 840 acgatagctggcataaccttctttctcaattcaggcttacccttcttgacagtagccat 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7212 acgatagctggcataaccttctttctcaattcaggcttacccttcttgacagtagccat 7270
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6877
Number of Sequences: 1807
Number of extensions: 6877
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)